Antimicrobial therapy | Medibuddy
24th June 2026

Antimicrobial therapy

Antibiotic therapy should be targeted based on the microorganism isolated from the blood cultures.  If patients are acutely unwell, empirical antibiotics should be commenced, however, this should be after at least two (preferably three) sets of blood cultures have been taken. The appropriate empirical antibiotic regimen depends on whether the valve in native or prosthetic, and depends on the likely causative microorganism, as summarised in Table 3.

Duration of therapy in NVIE is generally four to six weeks, whilst in PVIE the duration is usually a minimum of six weeks, and additional surgical management is often required.

Microorganism Recommended Antibiotics (British Society for Antimicrobial Chemotherapy and European Society of Cardiology)
Staphylococcus aureus (including coagulase negative) Native valve:
Methicillin-sensitive: flucloxacillin
Methicillin resistant: Vancomycin + rifampicin
OR daptomycin + rifampicin
OR gentamicin
Prosthetic valve:
Methicillin-sensitive: flucloxacillin + rifampicin + gentamicin
Methicillin-resistant: vancomycin + rifampicin + gentamicin
Methicillin and vancomycin resistant: daptomycin + rifampicin + gentamicin
Streptococcal species (including strep. bovis) Benzylpenicillin OR ceftriaxone
Moderately penicillin-resistant: Benzylpenicillin + gentamicin
Penicillin allergy: vancomycin + gentamicin
OR teicoplanin + gentamicin
Enterococcus Penicillin-sensitive: Amoxicillin OR penicillin
+ gentamicin
Penicillin resistant: vancomycin OR teicoplanin
+ gentamicin
HACEK group Ceftriaxone
OR combination therapy with Ampicillin + gentamicin
OR ciprofloxacin
(Note: gentamicin should only be given for first two weeks. NVIE treatment for 4 weeks, PVIE for 6 weeks)

Table 3: recommended empirical antibiotics in infective endocarditis

Mobile app screenshots

Take your subscriptions with you

Our mobile app allows you to access your interview and exam question banks wherever you are.